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Whole genome sequencing of bacterial genomes - tools and applications に戻る

デンマーク工科大学（Technical University of Denmark（DTU）） による Whole genome sequencing of bacterial genomes - tools and applications の受講者のレビューおよびフィードバック

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コースについて

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

人気のレビュー

AP

2020年7月19日

Thank you very much for this course through which i learnt basic handling of bioinformatics tools and concepts of WGS. This will help me a lot while pursuing my PhD research work in my field.

MB

2019年6月9日

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

フィルター：

Whole genome sequencing of bacterial genomes - tools and applications： 226 - 250 / 341 レビュー

by SRI J M

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2022年12月16日

𝓔𝔁𝓬𝓮𝓵𝓵𝓮𝓷𝓬𝓮

by CHUKKA S K

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2020年12月2日

very understandable

by Rhudith C

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2022年9月26日

very informative!

by Reghan M

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2021年9月1日

Its a great course

by Revathy B

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2020年5月26日

really informative

by Hajar F A

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2020年4月23日

Really appreciate!

by Dr A V

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2021年7月15日

good intellectual

by Ackshaya M S

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2022年1月21日

very nice course

by Md A

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2021年7月3日

Excellent course

by Shanmukha A P

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2020年6月8日

Excellent course

by davis e

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2022年5月23日

amazing course

by Khder h y

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2021年11月23日

Thank you alot

by Abdul F S

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2021年7月6日

it was amazing

by Christian A

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2020年6月6日

Easy to follow

by Bertram K

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2020年8月2日

Great Course!

by Vitasta J

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2022年6月30日

Informative.

by Mehdi G

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2022年2月26日

Constructive

by A A A E

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2019年1月8日

applications

by shuva s

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2018年4月9日

Learnt a lot

by Habeeb M

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2022年1月15日

excellent

by Bavani L

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2020年6月4日

Nice good

by Abhinandan C

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2017年11月16日

Great One

by Lelamekala V

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2021年9月28日

Good

by VASAVA M M

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2021年1月12日

nice

by Dr M

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2020年9月25日

nice

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